MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3299c · 46 genes shown · anchor phoY1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
atsB (requalified) — arylsulfatase AtsB atsB Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c Rv0712 (family_assigned) — formylglycine-generating enzyme family protein Rv0712 phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 lpqC (family_assigned) — PHB depolymerase family esterase lpqC Rv3493c (requalified) — mammalian cell entry protein Rv3493c glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC Rv3492c (requalified) — Mce associated protein Rv3492c Rv0178 (requalified) — Mce associated membrane protein Rv0178 iniA (requalified) — isoniazid inductible protein IniA iniA pks17 (requalified) — polyketide synthase pks17 lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA rsfS (requalified) — ribosome silencing factor rsfS rplU (requalified) — 50S ribosomal protein L21 rplU rplQ (requalified) — 50S ribosomal protein L17 rplQ rplM (requalified) — 50S ribosomal protein L13 rplM Rv3077 (requalified) — hydrolase Rv3077 atsA (requalified) — arylsulfatase AtsA atsA Rv0296c (requalified) — sulfatase Rv0296c atsD (requalified) — arylsulfatase AtsD atsD Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 phoT (family_assigned) — phosphate ABC transporter ATP-binding protein PstB phoT pstA1 (family_assigned) — phosphate ABC transporter permease PstA pstA1 pstA2 (family_assigned) — phosphate ABC transporter permease PstA pstA2 pstB (family_assigned) — phosphate ABC transporter ATP-binding protein pstB Rv0519c (family_assigned) — membrane protein Rv0519c mce4D (family_assigned) — virulence factor Mce family protein mce4D mce4F (family_assigned) — virulence factor Mce family protein mce4F mce4C (family_assigned) — virulence factor Mce family protein mce4C lprN (family_assigned) — Mce family lipoprotein LprN lprN mce4B (family_assigned) — virulence factor Mce family protein mce4B glpK (requalified) — glycerol kinase GlpK glpK glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 glgA (requalified) — glycogen synthase glgA glgP (family_assigned) — glycosyltransferase family 1 protein glgP glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB malQ (requalified) — 4-alpha-glucanotransferase malQ pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU mce4A (family_assigned) — Mce family protein Mce4A mce4A Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv0176 (family_assigned) — RDD family protein Rv0176

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.