MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3298c · 44 genes shown · anchor atsB · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqC (family_assigned) — PHB depolymerase family esterase lpqC atsB (requalified) — arylsulfatase AtsB atsB Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 Rv0519c (family_assigned) — membrane protein Rv0519c lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA Rv3304 (requalified) — gamma-glutamylcyclotransferase Rv3304 speE (requalified) — spermidine synthase speE Rv0712 (family_assigned) — formylglycine-generating enzyme family protein Rv0712 Rv3493c (requalified) — mammalian cell entry protein Rv3493c rsfS (requalified) — ribosome silencing factor rsfS rplU (requalified) — 50S ribosomal protein L21 rplU rplQ (requalified) — 50S ribosomal protein L17 rplQ rplM (requalified) — 50S ribosomal protein L13 rplM phoT (family_assigned) — phosphate ABC transporter ATP-binding protein PstB phoT pstA1 (family_assigned) — phosphate ABC transporter permease PstA pstA1 pstA2 (family_assigned) — phosphate ABC transporter permease PstA pstA2 pstB (family_assigned) — phosphate ABC transporter ATP-binding protein pstB Rv0178 (requalified) — Mce associated membrane protein Rv0178 glpK (requalified) — glycerol kinase GlpK glpK glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 pks13 (requalified) — polyketide synthase Pks13 pks13 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA Rv3231c (family_assigned) — hypothetical protein Rv3231c Rv3916c (requalified) — acetyltransferase Rv3916c Rv3118 (family_assigned) — hypothetical protein Rv3118 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c Rv2600 (family_assigned) — integral membrane protein Rv2600 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv2597 (dark) — DUF4178 domain-containing protein Rv2597 Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.