MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3297 · 46 genes shown · anchor lhr · open gene page → · ← back to 1 hop

Evidence: Min score 0
nei (requalified) — endonuclease VIII Nei2 nei lhr (requalified) — ATP-dependent helicase lhr Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c Rv3295 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3295 polA (requalified) — DNA polymerase I polA Rv2191 (family_assigned) — hypothetical protein Rv2191 Rv0944 (requalified) — formamidopyrimidine-DNA glycosylase Rv0944 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd coaE (requalified) — dephospho-CoA kinase coaE Rv3294c (family_assigned) — hypothetical protein Rv3294c Rv2090 (requalified) — 5'-3' exonuclease Rv2090 Rv1870c (family_assigned) — hypothetical protein Rv1870c radA (requalified) — DNA repair protein RadA radA Rv3242c (family_assigned) — ComF family protein Rv3242c rpiB (requalified) — ribose-5-phosphate isomerase B rpiB Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c pepN (requalified) — aminopeptidase PepN pepN adnA (requalified) — ATP-dependent DNA helicase AdnA adnA fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 Rv0210 (family_assigned) — hypothetical protein Rv0210 papA3 (requalified) — acyltransferase PapA3 papA3 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg Rv0945 (requalified) — oxidoreductase Rv0945 Rv0943c (dark) — hypothetical protein Rv0943c Rv1903 (family_assigned) — phage holin family protein Rv1903 Rv3292 (family_assigned) — VOC family protein Rv3292 acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT ackA (requalified) — acetate kinase ackA fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB acpS (requalified) — holo-ACP synthase acpS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.