MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3293 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv3292 (family_assigned) — VOC family protein Rv3292 acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT ackA (requalified) — acetate kinase ackA fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 adhB (requalified) — alcohol dehydrogenase B adhB adh (requalified) — zinc-binding dehydrogenase adh gadB (requalified) — glutamate decarboxylase gadB adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA adhC (requalified) — NAD(P)-dependent alcohol dehydrogenase adhC mmsB (requalified) — 3-hydroxyisobutyrate dehydrogenase mmsB lrpA (family_assigned) — transcriptional regulator LrpA lrpA lat (requalified) — L-lysine 6-transaminase lat Rv3289c (dark) — hypothetical protein Rv3289c usfY (family_assigned) — hypothetical protein usfY gdh (requalified) — NAD-glutamate dehydrogenase gdh gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC citA (requalified) — citrate synthase 2 citA glcB (requalified) — malate synthase G glcB Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 pta (requalified) — phosphate acetyltransferase pta aldA (requalified) — aldehyde dehydrogenase aldA Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 dhaA (requalified) — haloalkane dehalogenase dhaA Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c aofH (family_assigned) — flavin monoamine oxidase family protein aofH panC (requalified) — pantoate--beta-alanine ligase panC rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA glpK (requalified) — glycerol kinase GlpK glpK fadE9 (family_assigned) — acyl-CoA dehydrogenase family protein fadE9 echA9 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA9

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.