MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3278c · 46 genes shown · anchor birA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3278c (family_assigned) — PH domain-containing protein Rv3278c birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA accE5 (family_assigned) — acyl-CoA carboxylase subunit epsilon accE5 accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 Rv3282 (requalified) — nucleoside triphosphate pyrophosphatase Rv3282 Rv1227c (family_assigned) — PH domain-containing protein Rv1227c Rv1234 (requalified) — general stress protein Rv1234 35kd_ag (family_assigned) — hypothetical protein 35kd_ag sseA (requalified) — sulfurtransferase sseA Rv2468c (requalified) — hypothetical protein Rv2468c Rv3284 (family_assigned) — SufE family protein Rv3284 Rv1638A (family_assigned) — hypothetical protein Rv1638A Rv0049 (dark) — hypothetical protein Rv0049 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 bioB (requalified) — biotin synthase BioB bioB bisC (requalified) — molybdopterin guanine dinucleotide-containing S/N- bisC accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 Rv1722 (requalified) — biotin carboxylase Rv1722 accA2 (family_assigned) — biotin carboxylase N-terminal domain-containing pr accA2 Rv1322A (family_assigned) — hypothetical protein Rv1322A mutT3 (requalified) — 8-oxo-dGTP diphosphatase mutT3 dusB (requalified) — tRNA dihydrouridine synthase DusB dusB Rv1226c (family_assigned) — PH domain-containing protein Rv1226c Rv1225c (family_assigned) — HAD-IIA family hydrolase Rv1225c lpqX (dark) — hypothetical protein lpqX moeA2 (requalified) — molybdopterin molybdenumtransferase moeA2 pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA lpqY (family_assigned) — trehalose ABC transporter substrate-binding protei lpqY sugA (family_assigned) — trehalose ABC transporter permease SugA sugA sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC sugB (family_assigned) — trehalose ABC transporter permease SugB sugB Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ clgR (family_assigned) — transcriptional regulator ClgR clgR Rv2743c (family_assigned) — hypothetical protein Rv2743c htpX (requalified) — zinc metalloprotease HtpX htpX sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c sseB (requalified) — sulfurtransferase sseB iscS (family_assigned) — cysteine desulfurase family protein iscS cysA2 (requalified) — sulfurtransferase cysA2 sirA (requalified) — sulfite reductase sirA cysH (requalified) — phosphoadenylyl-sulfate reductase cysH Rv2468A (family_assigned) — hypothetical protein Rv2468A qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.