MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3271c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3271c (requalified) — cation transporter Rv3271c Rv3272 (requalified) — CoA transferase Rv3272 mdh (requalified) — malate dehydrogenase mdh Rv3273 (requalified) — transmembrane carbonic anhydrase Rv3273 Rv0648 (requalified) — alpha-mannosidase Rv0648 Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c cmk (requalified) — (d)CMP kinase cmk cmtR (family_assigned) — Cd(II)/Pb(II)-sensing metalloregulatory transcript cmtR Rv2683 (family_assigned) — hypothetical protein Rv2683 Rv3483c (family_assigned) — LppP/LprE family lipoprotein Rv3483c lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c Rv1457c (family_assigned) — ABC transporter permease Rv1457c fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 oxcA (requalified) — oxalyl-CoA decarboxylase oxcA pepD (requalified) — serine protease PepD pepD htrA (requalified) — serine protease HtrA htrA citA (requalified) — citrate synthase 2 citA gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca canB (requalified) — beta-carbonic anhydrase CanB canB canA (requalified) — beta-carbonic anhydrase CanA canA pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas Rv0650 (family_assigned) — ROK family protein Rv0650 fabD2 (requalified) — malonyl CoA-acyl carrier protein transacylase fabD2 Rv0745 (family_assigned) — hypothetical protein Rv0745 galK (requalified) — galactokinase galK Rv1999c (family_assigned) — APC family permease Rv1999c Rv0371c (family_assigned) — NTP transferase domain-containing protein Rv0371c Rv2160A (family_assigned) — Conserved hypothetical protein Rv2160A Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv2161c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv2161c murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE ftsQ (requalified) — cell division protein FtsQ ftsQ murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX engA (requalified) — ribosome biogenesis GTPase Der engA Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.