MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3270 · 46 genes shown · anchor rmlD · open gene page → · ← back to 1 hop

Evidence: Min score 0
ctpC (requalified) — manganese-exporting P-type ATPase CtpC ctpC Rv3269 (family_assigned) — DUF1490 family protein Rv3269 lcp1 (requalified) — phosphotransferase Lcp1 lcp1 Rv3268 (family_assigned) — hypothetical protein Rv3268 sodC (family_assigned) — superoxide dismutase family protein sodC rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD Rv2326c (family_assigned) — ABC transporter ATP-binding protein Rv2326c wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ctpH (requalified) — cation-translocating P-type ATPase ctpH ctpI (requalified) — cation-transporter ATPase I ctpI smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB ctpJ (requalified) — heavy metal translocating P-type ATPase ctpJ manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB steA (family_assigned) — putative cytokinetic ring protein SteA steA Rv1312 (family_assigned) — DUF2550 domain-containing protein Rv1312 rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv2876 (requalified) — transmembrane protein Rv2876 qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 Rv2325c (family_assigned) — CbiQ family ECF transporter T component Rv2325c Rv2327 (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2327 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pta (requalified) — phosphate acetyltransferase pta Rv1610 (family_assigned) — TIGR02234 family membrane protein Rv1610 dppA (family_assigned) — ABC transporter substrate-binding protein dppA glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 rfe (requalified) — UDP-N-acetylglucosamine--decaprenyl-phosphate N-ac rfe ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1722 (requalified) — biotin carboxylase Rv1722 rpe (requalified) — ribulose-phosphate 3-epimerase rpe Rv2851c (family_assigned) — GNAT family N-acetyltransferase Rv2851c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.