MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3242c · 46 genes shown · anchor mtrB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3242c (family_assigned) — ComF family protein Rv3242c xerC (requalified) — tyrosine recombinase XerC xerC Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA apt (requalified) — adenine phosphoribosyltransferase apt hemY (requalified) — protoporphyrinogen oxidase hemY nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv3243c (family_assigned) — LmeA family phospholipid-binding protein Rv3243c mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB dprA (requalified) — DNA-processing protein DprA dprA Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 viuB (requalified) — siderophore-interacting protein viuB whiA (family_assigned) — DNA-binding protein WhiA whiA fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 hisC2 (requalified) — histidinol-phosphate transaminase hisC2 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC Rv0948c (requalified) — chorismate mutase Rv0948c pheA (requalified) — prephenate dehydratase pheA Rv1885c (requalified) — chorismate mutase Rv1885c guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA purB (requalified) — adenylosuccinate lyase purB purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH gmk (requalified) — guanylate kinase gmk deoD (requalified) — purine-nucleoside phosphorylase deoD adoK (family_assigned) — carbohydrate kinase family protein adoK hemE (requalified) — uroporphyrinogen decarboxylase hemE hemZ (requalified) — ferrochelatase hemZ Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ Rv0958 (family_assigned) — ATP-binding protein Rv0958 echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 sugI (requalified) — sugar-transport integral membrane protein SugI sugI glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS mrsA (requalified) — phosphoglucosamine mutase mrsA devB (requalified) — 6-phosphogluconolactonase devB Rv0669c (requalified) — neutral ceramidase Rv0669c rfbD (family_assigned) — ABC transporter permease rfbD glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.