MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3239c · 45 genes shown · anchor mddA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3239c (requalified) — MFS transporter Rv3239c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv3238c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv3238c nadE (requalified) — NAD(+) synthase nadE pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv0386 (family_assigned) — LuxR family transcriptional regulator Rv0386 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c secA1 (family_assigned) — protein translocase subunit SecA secA1 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv1359 (family_assigned) — transcriptional regulator Rv1359 moeY (family_assigned) — Rv1355c family protein moeY Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c Rv1356c (requalified) — hypothetical protein Rv1356c Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 sahH (requalified) — adenosylhomocysteinase sahH sseA (requalified) — sulfurtransferase sseA mmuM (requalified) — homocysteine S-methyltransferase mmuM cysA2 (requalified) — sulfurtransferase cysA2 sseB (requalified) — sulfurtransferase sseB metH (requalified) — methionine synthase metH nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD cobB (requalified) — NAD-dependent protein deacylase cobB ppnK (requalified) — NAD kinase ppnK sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA nudC (requalified) — NAD(+) diphosphatase nudC fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 Rv3728 (requalified) — MFS transporter Rv3728 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR kdpE (requalified) — two-component system response regulator KdpE kdpE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.