MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3227 · 46 genes shown · anchor aroF · open gene page → · ← back to 1 hop

Evidence: Min score 0
aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA aroF (requalified) — chorismate synthase aroF aroE (requalified) — shikimate dehydrogenase aroE aroB (requalified) — 3-dehydroquinate synthase aroB aroK (requalified) — shikimate kinase AroK aroK cmk (requalified) — (d)CMP kinase cmk rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA Rv3226c (requalified) — SOS response-associated peptidase Rv3226c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA gltB (family_assigned) — glutamate synthase large subunit gltB Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c serC (requalified) — phosphoserine transaminase serC Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c mltG (requalified) — endolytic transglycosylase MltG mltG aroD (requalified) — type II 3-dehydroquinate dehydratase aroD Rv2551c (family_assigned) — A24 family peptidase Rv2551c aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG engA (requalified) — ribosome biogenesis GTPase Der engA Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA rpsA (requalified) — 30S ribosomal protein S1 rpsA thiL (requalified) — thiamine-phosphate kinase thiL thiE (requalified) — thiamine phosphate synthase thiE adk (requalified) — adenylate kinase adk rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsI (requalified) — 30S ribosomal protein S9 rpsI xerC (requalified) — tyrosine recombinase XerC xerC Rv3225c (family_assigned) — bifunctional GNAT family N-acetyltransferase/amino Rv3225c rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE Rv3242c (family_assigned) — ComF family protein Rv3242c hisC2 (requalified) — histidinol-phosphate transaminase hisC2 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC pheA (requalified) — prephenate dehydratase pheA gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 trpE (requalified) — anthranilate synthase component I trpE fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.