MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3219 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c secG (family_assigned) — preprotein translocase subunit SecG secG rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv1321 (requalified) — endonuclease NucS Rv1321 Rv3218 (family_assigned) — diacylglycerol kinase family lipid kinase Rv3218 Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv1025 (dark) — hypothetical protein Rv1025 pcnA (requalified) — poly(A) polymerase PcnA pcnA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rnhB (requalified) — ribonuclease HII rnhB lepB (requalified) — signal peptidase I lepB rplS (requalified) — 50S ribosomal protein L19 rplS secE1 (requalified) — preprotein translocase SecE secE1 secY (family_assigned) — preprotein translocase subunit SecY secY yidC (requalified) — membrane protein insertase YidC yidC secA1 (family_assigned) — protein translocase subunit SecA secA1 secA2 (requalified) — accessory Sec system translocase SecA2 secA2 ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY helZ (requalified) — DEAD/DEAH box helicase helZ Rv1322 (family_assigned) — hypothetical protein Rv1322 Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c Rv3217c (dark) — hypothetical protein Rv3217c groEL2 (requalified) — chaperonin GroEL groEL2 groEL1 (requalified) — chaperonin GroEL groEL1 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c Rv3118 (family_assigned) — hypothetical protein Rv3118 Rv3194c (family_assigned) — PDZ domain-containing protein Rv3194c Rv3196 (family_assigned) — hypothetical protein Rv3196 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 eno (requalified) — phosphopyruvate hydratase eno lpqU (requalified) — lytic murein transglycosylase lpqU

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.