MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3218 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3218 (family_assigned) — diacylglycerol kinase family lipid kinase Rv3218 Rv3217c (dark) — hypothetical protein Rv3217c whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 groEL2 (requalified) — chaperonin GroEL groEL2 groEL1 (requalified) — chaperonin GroEL groEL1 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c Rv3118 (family_assigned) — hypothetical protein Rv3118 eno (requalified) — phosphopyruvate hydratase eno Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 Rv3231c (family_assigned) — hypothetical protein Rv3231c Rv3752c (requalified) — nucleoside deaminase Rv3752c Rv1592c (family_assigned) — lipase family protein Rv1592c whiB5 (family_assigned) — transcriptional regulator WhiB5 whiB5 Rv0358 (requalified) — peptidase M50 Rv0358 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1083 (dark) — hypothetical protein Rv1083 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c secG (family_assigned) — preprotein translocase subunit SecG secG rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ groES (requalified) — chaperonin GroES groES hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 dnaK (requalified) — molecular chaperone DnaK dnaK cysA2 (requalified) — sulfurtransferase cysA2 cysA3 (requalified) — thiosulfate sulfurtransferase cysA3 Rv2468c (requalified) — hypothetical protein Rv2468c Rv2365c (requalified) — cytidine deaminase Rv2365c Rv1332 (family_assigned) — transcriptional regulator Rv1332 moaE1 (family_assigned) — molybdopterin synthase catalytic subunit 1 moaE1 Rv3120 (requalified) — class I SAM-dependent methyltransferase Rv3120 pykA (requalified) — pyruvate kinase pykA pgk (requalified) — phosphoglycerate kinase pgk gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 pgi (requalified) — glucose-6-phosphate isomerase pgi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap fba (requalified) — class II fructose-bisphosphate aldolase fba Rv2843 (family_assigned) — hypothetical protein Rv2843 nusA (requalified) — transcription termination factor NusA nusA rimP (requalified) — ribosome maturation factor RimP rimP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.