MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3213c · 46 genes shown · anchor parB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3213c (family_assigned) — AAA family ATPase Rv3213c parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB entC (requalified) — isochorismate synthase entC gpm2 (requalified) — phosphoglycerate mutase gpm2 Rv2647 (requalified) — hypothetical protein Rv2647 ftsK (requalified) — DNA translocase FtsK ftsK dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA ftsZ (requalified) — cell division protein FtsZ ftsZ ligA (requalified) — NAD-dependent DNA ligase LigA ligA hisS (requalified) — histidine--tRNA ligase hisS accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP ffh (requalified) — signal recognition particle protein ffh parA (requalified) — chromosome partitioning protein ParA parA gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv1708 (requalified) — initiation inhibitor protein Rv1708 Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c yidC (requalified) — membrane protein insertase YidC yidC mbtB (requalified) — phenyloxazoline synthase MbtB mbtB menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD mbtI (requalified) — salicylate synthase mbtI mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA aroF (requalified) — chorismate synthase aroF Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c thyA (requalified) — thymidylate synthase ThyA thyA pfkA (requalified) — ATP-dependent 6-phosphofructokinase pfkA pgi (requalified) — glucose-6-phosphate isomerase pgi fba (requalified) — class II fructose-bisphosphate aldolase fba Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 Rv2645 (family_assigned) — hypothetical protein Rv2645 Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB xerC (requalified) — tyrosine recombinase XerC xerC dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK dnaB (requalified) — replicative DNA helicase dnaB recF (requalified) — DNA replication/repair protein RecF recF Rv2147c (requalified) — cell division protein SepF Rv2147c murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c yfiH (family_assigned) — laccase domain-containing protein yfiH ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv2146c (family_assigned) — YggT family protein Rv2146c fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu ligB (requalified) — ATP-dependent DNA ligase ligB Rv3015c (requalified) — methionine synthase Rv3015c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.