MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3203 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lipV (requalified) — lipase LipV lipV Rv3204 (family_assigned) — MGMT family protein Rv3204 Rv3591c (family_assigned) — alpha/beta hydrolase Rv3591c adnB (requalified) — ATP-dependent DNA helicase AdnB adnB Rv2001 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv2001 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas Rv1683 (requalified) — acyl-CoA synthetase Rv1683 pks1 (requalified) — polyketide synthase pks1 lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv1558 (requalified) — F420H(2)-dependent quinone reductase Rv1558 adnA (requalified) — ATP-dependent DNA helicase AdnA adnA mhuD (requalified) — mycobilin-forming heme oxygenase MhuD mhuD lpqF (requalified) — serine hydrolase lpqF octT (requalified) — diglucosylglycerate octanoyltransferase octT PE_PGRS58 (family_assigned) — PE-PGRS family protein PE_PGRS58 PE_PGRS58 Rv3415c (family_assigned) — hypothetical protein Rv3415c uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 Rv3200c (family_assigned) — potassium channel family protein Rv3200c nudC (requalified) — NAD(+) diphosphatase nudC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv2000 (family_assigned) — FAD/NAD(P)-binding protein Rv2000 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv1684 (family_assigned) — Trm112 family protein Rv1684 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC lprC (family_assigned) — DUF3558 domain-containing protein lprC rplS (requalified) — 50S ribosomal protein L19 rplS rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rplM (requalified) — 50S ribosomal protein L13 rplM rplN (requalified) — 50S ribosomal protein L14 rplN

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.