MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3202c · 45 genes shown · anchor adnB · open gene page → · ← back to 1 hop

Evidence: Min score 0
adnA (requalified) — ATP-dependent DNA helicase AdnA adnA adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 Rv2191 (family_assigned) — hypothetical protein Rv2191 nudC (requalified) — NAD(+) diphosphatase nudC radA (requalified) — DNA repair protein RadA radA Rv3200c (family_assigned) — potassium channel family protein Rv3200c recA (requalified) — intein-containing recombinase RecA recA uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 disA (requalified) — DNA integrity scanning diadenylate cyclase DisA disA dnaB (requalified) — replicative DNA helicase dnaB Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c cobB (requalified) — NAD-dependent protein deacylase cobB nadE (requalified) — NAD(+) synthase nadE cinA (requalified) — competence/damage-inducible protein A cinA pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 nadC (requalified) — carboxylating nicotinate-nucleotide diphosphorylas nadC recX (requalified) — recombination regulator RecX recX thiL (requalified) — thiamine-phosphate kinase thiL lhr (requalified) — ATP-dependent helicase lhr fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu hemD (requalified) — uroporphyrin-III C-methyltransferase hemD Rv0948c (requalified) — chorismate mutase Rv0948c polA (requalified) — DNA polymerase I polA lexA (requalified) — transcriptional repressor LexA lexA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 mku (requalified) — Ku protein mku lpqE (family_assigned) — hypothetical protein lpqE Rv3714c (family_assigned) — hypothetical protein Rv3714c Rv2375 (family_assigned) — type II toxin-antitoxin system VapB family antitox Rv2375 dnaG (requalified) — DNA primase dnaG Rv0057 (dark) — hypothetical protein Rv0057 darT (requalified) — toxin-antitoxin system toxin DarT darT ssb (family_assigned) — single-stranded DNA-binding protein ssb rplI (requalified) — 50S ribosomal protein L9 rplI Rv2943A (requalified) — transposase Rv2943A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.