MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3200c · 46 genes shown · anchor nudC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3200c (family_assigned) — potassium channel family protein Rv3200c nudC (requalified) — NAD(+) diphosphatase nudC adnA (requalified) — ATP-dependent DNA helicase AdnA adnA adnB (requalified) — ATP-dependent DNA helicase AdnB adnB fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu hemD (requalified) — uroporphyrin-III C-methyltransferase hemD Rv0948c (requalified) — chorismate mutase Rv0948c Rv3013 (family_assigned) — amino acid-binding protein Rv3013 Rv0260c (requalified) — uroporphyrinogen-III synthase Rv0260c moaE1 (family_assigned) — molybdopterin synthase catalytic subunit 1 moaE1 moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX Rv0813c (family_assigned) — FABP family protein Rv0813c moaE2 (family_assigned) — molybdopterin synthase subunit MoaE2 moaE2 cobB (requalified) — NAD-dependent protein deacylase cobB nadE (requalified) — NAD(+) synthase nadE cinA (requalified) — competence/damage-inducible protein A cinA pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 nadC (requalified) — carboxylating nicotinate-nucleotide diphosphorylas nadC uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 Rv2191 (family_assigned) — hypothetical protein Rv2191 radA (requalified) — DNA repair protein RadA radA uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA hemC (requalified) — hydroxymethylbilane synthase hemC hemB (requalified) — porphobilinogen synthase hemB cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG hemA (requalified) — glutamyl-tRNA reductase hemA cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv0514 (dark) — hypothetical protein Rv0514 aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG aroF (requalified) — chorismate synthase aroF tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv1885c (requalified) — chorismate mutase Rv1885c rpsD (requalified) — 30S ribosomal protein S4 rpsD rplB (requalified) — 50S ribosomal protein L2 rplB rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsO (requalified) — 30S ribosomal protein S15 rpsO

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.