MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3198A · 46 genes shown · anchor uvrD2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3198A (requalified) — glutaredoxin protein Rv3198A nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 lpqQ (family_assigned) — sensor domain-containing protein lpqQ msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI mca (requalified) — mycothiol conjugate amidase Mca mca Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c mtr (requalified) — mycothione reductase mtr nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdH (requalified) — redoxin NrdH nrdH nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 nrdB (requalified) — R2-like ligand-binding oxidase nrdB Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 adnA (requalified) — ATP-dependent DNA helicase AdnA adnA recA (requalified) — intein-containing recombinase RecA recA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppH (requalified) — lipoprotein LppH lppH Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv3705c (family_assigned) — sensor domain-containing protein Rv3705c lpqA (family_assigned) — sensor domain-containing protein lpqA Rv0963c (family_assigned) — hypothetical protein Rv0963c msrB (requalified) — peptide-methionine (R)-S-oxide reductase MsrB msrB dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ thiX (family_assigned) — thioredoxin family protein thiX mpt53 (requalified) — protein disulfide oxidoreductase mpt53 Rv0526 (requalified) — thioredoxin Rv0526 Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c Rv1171 (family_assigned) — hypothetical protein Rv1171 mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC mshD (requalified) — mycothiol synthase mshD Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv0485 (family_assigned) — transcriptional regulator Rv0485

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.