MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3197A · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ carD (requalified) — RNA polymerase-binding transcription factor CarD carD sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 Rv0801 (family_assigned) — VOC family protein Rv0801 Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 Rv1417 (family_assigned) — PH domain-containing protein Rv1417 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH helZ (requalified) — DEAD/DEAH box helicase helZ ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv3679 (family_assigned) — ArsA family ATPase Rv3679 fadE5 (requalified) — acyl-CoA dehydrogenase fadE5 Rv3662c (requalified) — oxidoreductase Rv3662c fadE15 (requalified) — acyl-CoA dehydrogenase fadE15 TB16.3 (family_assigned) — SRPBCC family protein TB16.3 pepC (family_assigned) — M18 family aminopeptidase pepC Rv0799c (requalified) — Dyp-type peroxidase Rv0799c cfp29 (requalified) — family 1 encapsulin nanocompartment shell protein cfp29 Rv1727 (family_assigned) — TIGR03086 family metal-binding protein Rv1727 purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv0360c (family_assigned) — hypothetical protein Rv0360c Rv0499 (family_assigned) — thioesterase family protein Rv0499 Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv0496 (family_assigned) — hypothetical protein Rv0496 proC (requalified) — pyrroline-5-carboxylate reductase proC Rv0497 (family_assigned) — hypothetical protein Rv0497 Rv0500A (family_assigned) — DNA-binding protein Rv0500A ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH lprH (family_assigned) — hypothetical protein lprH mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.