MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3195 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 Rv3194c (family_assigned) — PDZ domain-containing protein Rv3194c Rv3196 (family_assigned) — hypothetical protein Rv3196 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA secG (family_assigned) — preprotein translocase subunit SecG secG Rv2693c (dark) — DUF3159 domain-containing protein Rv2693c Rv3193c (family_assigned) — UPF0182 family protein Rv3193c wag31 (requalified) — cell wall synthesis protein Wag31 wag31 whiA (family_assigned) — DNA-binding protein WhiA whiA Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 thiS (requalified) — sulfur carrier protein ThiS thiS clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 clpX (family_assigned) — ATP-dependent Clp protease ATP-binding subunit Clp clpX clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 tig (requalified) — trigger factor tig clpB (requalified) — chaperone protein ClpB clpB Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c mshD (requalified) — mycothiol synthase mshD prpD (requalified) — 2-methylcitrate dehydratase prpD ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB lipA (requalified) — lipoyl synthase lipA Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv2239c (family_assigned) — hypothetical protein Rv2239c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.