MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3183 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv1359 (family_assigned) — transcriptional regulator Rv1359 embR (requalified) — response regulator transcription factor EmbR embR mmr (requalified) — multidrug resistance protein Mmr mmr sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c cobB (requalified) — NAD-dependent protein deacylase cobB tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr lysE (requalified) — L-lysine exporter lysE Rv1931c (family_assigned) — transcriptional regulator Rv1931c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv1724c (dark) — hypothetical protein Rv1724c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 nadE (requalified) — NAD(+) synthase nadE ppnK (requalified) — NAD kinase ppnK pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 cinA (requalified) — competence/damage-inducible protein A cinA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.