MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3168 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3168 (family_assigned) — phosphotransferase family protein Rv3168 Rv3169 (family_assigned) — hypothetical protein Rv3169 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c fadE36 (family_assigned) — phosphotransferase family protein fadE36 aofH (family_assigned) — flavin monoamine oxidase family protein aofH Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c Rv0311 (family_assigned) — hypothetical protein Rv0311 Rv1874 (family_assigned) — hypothetical protein Rv1874 fadE22 (requalified) — acyl-CoA dehydrogenase fadE22 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1931c (family_assigned) — transcriptional regulator Rv1931c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 Rv2766c (requalified) — short-chain type dehydrogenase/reductase Rv2766c Rv3762c (requalified) — alkyl/aryl-sulfatase Rv3762c htdZ (requalified) — 3-hydroxyacyl-thioester dehydratase HtdZ htdZ Rv1703c (requalified) — O-methyltransferase Rv1703c helZ (requalified) — DEAD/DEAH box helicase helZ adh (requalified) — zinc-binding dehydrogenase adh pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0139 (family_assigned) — NAD-dependent epimerase/dehydratase family protein Rv0139 Rv0140 (family_assigned) — DUF427 domain-containing protein Rv0140 msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv3906c (requalified) — pullulanase Rv3906c ltp1 (requalified) — lipid-transfer protein ltp1 fadB (requalified) — fatty oxidation protein FadB fadB accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF Rv0771 (family_assigned) — carboxymuconolactone decarboxylase family protein Rv0771

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.