MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3137 · 46 genes shown · anchor pflA · open gene page → · ← back to 1 hop

Evidence: Min score 0
hisN (requalified) — histidinol-phosphatase hisN hisD (requalified) — histidinol dehydrogenase hisD hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC hisC2 (requalified) — histidinol-phosphate transaminase hisC2 pflA (requalified) — AmmeMemoRadiSam system radical SAM enzyme pflA Rv3136A (dark) — hypothetical protein Rv3136A PPE50 (family_assigned) — PPE family protein PPE50 PPE50 fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 nusA (requalified) — transcription termination factor NusA nusA fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF hisH (family_assigned) — imidazole glycerol phosphate synthase subunit HisH hisH hisA (requalified) — bifunctional 1-(5-phosphoribosyl)-5-((5-phosphorib hisA hisI (requalified) — phosphoribosyl-AMP cyclohydrolase hisI Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 pheA (requalified) — prephenate dehydratase pheA nirB (family_assigned) — nitrite reductase large subunit NirB nirB Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c PPE51 (family_assigned) — PPE family protein PPE51 PPE51 rpsI (requalified) — 30S ribosomal protein S9 rpsI glpK (requalified) — glycerol kinase GlpK glpK rpsF (requalified) — 30S ribosomal protein S6 rpsF serS (requalified) — serine--tRNA ligase serS fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadB (requalified) — fatty oxidation protein FadB fadB fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 rimP (requalified) — ribosome maturation factor RimP rimP rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG ltp1 (requalified) — lipid-transfer protein ltp1 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 echA6 (requalified) — enoyl-CoA hydratase echA6 fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.