MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3125c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE49 (family_assigned) — PPE family protein PPE49 PPE49 Rv0894 (family_assigned) — hypothetical protein Rv0894 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv0603 (family_assigned) — hypothetical protein Rv0603 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c lrpA (family_assigned) — transcriptional regulator LrpA lrpA moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c moaC1 (requalified) — cyclic pyranopterin monophosphate synthase accesso moaC1 Rv3126c (dark) — hypothetical protein Rv3126c Rv1359 (family_assigned) — transcriptional regulator Rv1359 PPE35 (family_assigned) — PPE family protein PPE35 PPE35 embR (requalified) — response regulator transcription factor EmbR embR Rv0891c (family_assigned) — hypothetical protein Rv0891c Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS prrB (requalified) — two-component system sensor histidine kinase PrrB prrB cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr lpqO (family_assigned) — DUF1259 domain-containing protein lpqO virS (family_assigned) — AraC family transcriptional regulator virS cobB (requalified) — NAD-dependent protein deacylase cobB Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1931c (family_assigned) — transcriptional regulator Rv1931c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR lat (requalified) — L-lysine 6-transaminase lat Rv3292 (family_assigned) — VOC family protein Rv3292 Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 moaA2 (requalified) — GTP 3'%2C8-cyclase MoaA moaA2 moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX moaE1 (family_assigned) — molybdopterin synthase catalytic subunit 1 moaE1 moaD1 (requalified) — molybdenum cofactor biosynthesis protein MoaD moaD1 mog (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis mog Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 Rv1735c (family_assigned) — membrane protein Rv1735c Rv1734c (family_assigned) — hypothetical protein Rv1734c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.