MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3098A · 45 genes shown · anchor vapC3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 mazE9 (requalified) — antitoxin MazE9 mazE9 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c vapB47 (requalified) — antitoxin VapB47 vapB47 mazE6 (requalified) — antitoxin MazE6 mazE6 Rv3098c (dark) — hypothetical protein Rv3098c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 vapB3 (family_assigned) — type II toxin-antitoxin system CcdA family antitox vapB3 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB9 (requalified) — antitoxin VapB9 vapB9 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 vapB12 (requalified) — antitoxin vapB12 vapB1 (requalified) — antitoxin VapB1 vapB1 Rv0064 (family_assigned) — UPF0182 family protein Rv0064 mazF9 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF9 mazF1 (requalified) — toxin MazF1 mazF1 mazF7 (requalified) — mRNA interferase MazF7 mazF7 mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC8 (family_assigned) — PIN domain-containing protein vapC8 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 lipY (requalified) — triacylglycerol lipase Lip lipY smpB (family_assigned) — SsrA-binding protein SmpB smpB ftsE (family_assigned) — cell division ATP-binding protein FtsE ftsE vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv0580c (requalified) — mycobacterial cell wall protein Rv0580c Rv0580c Rv3387 (requalified) — transposase Rv3387 Rv2961 (requalified) — transposase Rv2961 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB46 (requalified) — antitoxin VapB46 vapB46 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.