MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3071 · 46 genes shown · anchor crcB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3071 (family_assigned) — DUF190 domain-containing protein Rv3071 crcB (requalified) — fluoride efflux transporter CrcB crcB crcB (requalified) — fluoride efflux transporter CrcB crcB rsdA (requalified) — anti-sigma D factor RsdA rsdA pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0441c (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0441c Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 Rv2629 (family_assigned) — hypothetical protein Rv2629 Rv0493c (family_assigned) — hypothetical protein Rv0493c Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c Rv1913 (requalified) — MBL fold metallo-hydrolase Rv1913 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c lpqU (requalified) — lytic murein transglycosylase lpqU oppA (family_assigned) — oligopeptide ABC transporter substrate-binding pro oppA lpqL (family_assigned) — M28 family metallopeptidase lpqL sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0996 (family_assigned) — hypothetical protein Rv0996 glgP (family_assigned) — glycosyltransferase family 1 protein glgP pgi (requalified) — glucose-6-phosphate isomerase pgi glgA (requalified) — glycogen synthase glgA tkt (requalified) — transketolase tkt malQ (requalified) — 4-alpha-glucanotransferase malQ glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC Rv0209 (family_assigned) — hypothetical protein Rv0209 trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c Rv2474c (family_assigned) — hypothetical protein Rv2474c Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c PPE10 (family_assigned) — PPE family protein PPE10 PPE10 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c pirG (requalified) — exported repetitive protein pirG Rv3337 (family_assigned) — Conserved hypothetical protein Rv3337 Rv0885 (requalified) — diiron oxygenase Rv0885 trpS (requalified) — tryptophan--tRNA ligase trpS fprB (requalified) — FAD-dependent oxidoreductase fprB Rv2630 (requalified) — archease Rv2630 rpsC (requalified) — 30S ribosomal protein S3 rpsC rplW (requalified) — 50S ribosomal protein L23 rplW Rv2631 (requalified) — RNA-splicing ligase RtcB Rv2631 hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.