MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3053c · 46 genes shown · anchor nrdE · open gene page → · ← back to 1 hop

Evidence: Min score 0
nrdH (requalified) — redoxin NrdH nrdH nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 Rv3050c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3050c Rv2204c (requalified) — iron-sulfur cluster assembly accessory protein Rv2204c Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 pks12 (requalified) — type I polyketide synthase pks12 nrdB (requalified) — R2-like ligand-binding oxidase nrdB tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk Rv3047c (dark) — hypothetical protein Rv3047c Rv3049c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3049c Rv0250c (family_assigned) — hypothetical protein Rv0250c Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 Rv2205c (requalified) — glycerate kinase Rv2205c iscS (family_assigned) — cysteine desulfurase family protein iscS Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR msrB (requalified) — peptide-methionine (R)-S-oxide reductase MsrB msrB dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ thiX (family_assigned) — thioredoxin family protein thiX mpt53 (requalified) — protein disulfide oxidoreductase mpt53 Rv0526 (requalified) — thioredoxin Rv0526 Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX cysO (requalified) — sulfur carrier protein CysO cysO moaD2 (family_assigned) — molybdopterin synthase subunit MoaD2 moaD2 moaD1 (requalified) — molybdenum cofactor biosynthesis protein MoaD moaD1 moeB2 (requalified) — molybdenum cofactor biosynthesis protein MoeB moeB2 fas (requalified) — fatty acid synthase fas

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.