MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3039c · 46 genes shown · anchor fadB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
echA17 (requalified) — enoyl-CoA hydratase echA17 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv3040c (requalified) — NUDIX hydrolase Rv3040c Rv3041c (family_assigned) — ABC transporter ATP-binding protein Rv3041c Rv3038c (family_assigned) — methyltransferase domain-containing protein Rv3038c serB2 (requalified) — phosphoserine phosphatase SerB serB2 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 echA8 (requalified) — enoyl-CoA hydratase echA8 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD TB22.2 (family_assigned) — RsiV family protein TB22.2 ugpC (family_assigned) — ABC transporter ATP-binding protein ugpC Rv3034c (requalified) — acetyltransferase Rv3034c Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c serC (requalified) — phosphoserine transaminase serC trpB (family_assigned) — tryptophan synthase subunit beta trpB glyA1 (requalified) — serine hydroxymethyltransferase glyA1 glyA2 (requalified) — serine hydroxymethyltransferase glyA2 cbs (requalified) — cystathionine beta-synthase cbs trpA (family_assigned) — tryptophan synthase subunit alpha trpA ltp1 (requalified) — lipid-transfer protein ltp1 fadB (requalified) — fatty oxidation protein FadB fadB accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 echA16 (requalified) — enoyl-CoA hydratase echA16 fadE36 (family_assigned) — phosphotransferase family protein fadE36 ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 echA6 (requalified) — enoyl-CoA hydratase echA6 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 accD2 (family_assigned) — acyl-CoA carboxylase subunit beta accD2 Rv0976c (family_assigned) — acyclic terpene utilization AtuA family protein Rv0976c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.