MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3035 · 46 genes shown · anchor lprC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3035 (family_assigned) — hypothetical protein Rv3035 lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv3802c (requalified) — phospholipase Rv3802c aftA (requalified) — galactan 5-O-arabinofuranosyltransferase aftA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv3668c (requalified) — protease Rv3668c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 Rv2876 (requalified) — transmembrane protein Rv2876 lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 rplS (requalified) — 50S ribosomal protein L19 rplS rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU rplM (requalified) — 50S ribosomal protein L13 rplM rplN (requalified) — 50S ribosomal protein L14 rplN aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c embA (requalified) — arabinosyltransferase EmbA embA fbpD (requalified) — MPT51/MPB51 antigen fbpD pks13 (requalified) — polyketide synthase Pks13 pks13 aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA embB (requalified) — arabinosyltransferase EmbB embB embC (requalified) — arabinosyltransferase EmbC embC dprE2 (requalified) — decaprenylphosphoryl-D-2-keto erythropentose reduc dprE2 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 ephC (requalified) — epoxide hydrolase EphC ephC pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv0531 (family_assigned) — DUF4229 domain-containing protein Rv0531 Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 pyrE (requalified) — orotate phosphoribosyltransferase pyrE pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB Rv0381c (dark) — hypothetical protein Rv0381c lmeA (requalified) — mannan chain length control protein LmeA lmeA ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.