MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3017c · 45 genes shown · anchor PPE46 · open gene page → · ← back to 1 hop

Evidence: Min score 0
esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ esxS (requalified) — ESAT-6 like protein EsxS esxS esxG (requalified) — type VII secretion system protein EsxG esxG PPE46 (family_assigned) — PPE family protein PPE46 PPE46 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 PE27A (family_assigned) — PE family protein PE27A PE27A PE29 (family_assigned) — PE family protein PE29 PE29 Rv0894 (family_assigned) — hypothetical protein Rv0894 esxA (requalified) — ESAT-6 protein EsxA esxA esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ PPE66 (family_assigned) — PPE family protein PPE66 PPE66 Rv1816 (family_assigned) — HTH-type transcriptional regulator Rv1816 Rv1668c (family_assigned) — Probable first part of macrolide-transport ATP-bin Rv1668c esxR (family_assigned) — WXG100 family type VII secretion target esxR esxH (requalified) — type VII secretion system effector EsxH esxH esxV (requalified) — ESAT-6 like protein EsxV esxV esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 Rv2738c (family_assigned) — DUF3046 domain-containing protein Rv2738c eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE10 (family_assigned) — PE family protein PE10 PE10 PPE67 (family_assigned) — PPE family protein PPE67 PPE67 moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 embR (requalified) — response regulator transcription factor EmbR embR Rv0891c (family_assigned) — hypothetical protein Rv0891c Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 esxO (requalified) — type VII secretion system effector EsxO esxO esxW (requalified) — type VII secretion system protein EsxW esxW esxI (requalified) — type VII secretion system ESX-5 protein EsxL esxI esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL esxN (requalified) — ESAT-6 like protein EsxN esxN esxK (requalified) — type VII secretion system ESX-5 protein EsxJ esxK esxP (requalified) — type VII secretion system ESX-5 protein EsxJ esxP Rv3517 (family_assigned) — hypothetical protein Rv3517

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.