MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3011c · 46 genes shown · anchor gatC · open gene page → · ← back to 1 hop

Evidence: Min score 0
gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB pfkA (requalified) — ATP-dependent 6-phosphofructokinase pfkA aspS (requalified) — aspartate--tRNA ligase aspS Rv3013 (family_assigned) — amino acid-binding protein Rv3013 gltS (requalified) — glutamate--tRNA ligase gltS pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB ligA (requalified) — NAD-dependent DNA ligase LigA ligA atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB amiD (requalified) — amidase amiD amiA2 (requalified) — amidase amiA2 amiC (requalified) — amidase amiC amiB2 (requalified) — amidase amiB2 pgi (requalified) — glucose-6-phosphate isomerase pgi fba (requalified) — class II fructose-bisphosphate aldolase fba guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA tkt (requalified) — transketolase tkt tal (requalified) — transaldolase tal Rv2571c (family_assigned) — aromatic acid exporter family protein Rv2571c hisS (requalified) — histidine--tRNA ligase hisS alaS (requalified) — alanine--tRNA ligase alaS rpsD (requalified) — 30S ribosomal protein S4 rpsD rplB (requalified) — 50S ribosomal protein L2 rplB rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsO (requalified) — 30S ribosomal protein S15 rpsO rplO (requalified) — 50S ribosomal protein L15 rplO rpsE (requalified) — 30S ribosomal protein S5 rpsE rplW (requalified) — 50S ribosomal protein L23 rplW rplR (requalified) — 50S ribosomal protein L18 rplR rplF (requalified) — 50S ribosomal protein L6 rplF rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rplJ (requalified) — 50S ribosomal protein L10 rplJ Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c Rv2028c (requalified) — universal stress protein Rv2028c ligB (requalified) — ATP-dependent DNA ligase ligB Rv3015c (requalified) — methionine synthase Rv3015c leuS (requalified) — leucine--tRNA ligase leuS ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.