MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3008 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3008 (family_assigned) — MgtC/SapB family protein Rv3008 Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c Rv3007c (family_assigned) — flavin reductase family protein Rv3007c ctpH (requalified) — cation-translocating P-type ATPase ctpH ctpF (requalified) — cation-transporting P-type ATPase ctpF ctpE (requalified) — cation-translocating P-type ATPase ctpE ctpI (requalified) — cation-transporter ATPase I ctpI gadB (requalified) — glutamate decarboxylase gadB cinA (requalified) — competence/damage-inducible protein A cinA clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 panD (requalified) — aspartate 1-decarboxylase panD rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1667c (family_assigned) — Probable second part of macrolide-transport ATP-bi Rv1667c cya (requalified) — adenylate cyclase cya cydA (family_assigned) — cytochrome D ubiquinol oxidase subunit I CydA cydA cydB (family_assigned) — cytochrome d ubiquinol oxidase subunit II cydB cydD (family_assigned) — cytochrome biosyntheisis ABC transporter ATP-bindi cydD cydC (family_assigned) — thiol reductant ABC exporter subunit CydC cydC mgtC (family_assigned) — MgtC/SapB family protein mgtC Rv1939 (family_assigned) — flavin reductase family protein Rv1939 Rv0245 (family_assigned) — flavin reductase family protein Rv0245 gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB Rv3079c (requalified) — LLM class F420-dependent oxidoreductase Rv3079c Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c Rv2851c (family_assigned) — GNAT family N-acetyltransferase Rv2851c Rv0426c (dark) — hypothetical protein Rv0426c Rv0424c (dark) — hypothetical protein Rv0424c atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv2625c (family_assigned) — site-2 protease family protein Rv2625c pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB Rv2028c (requalified) — universal stress protein Rv2028c Rv2624c (requalified) — universal stress protein Rv2624c Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narX (family_assigned) — respiratory nitrate reductase subunit gamma narX Rv0907 (family_assigned) — hypothetical protein Rv0907 Rv0906 (requalified) — MBL fold metallo-hydrolase Rv0906 echA6 (requalified) — enoyl-CoA hydratase echA6 Rv0909 (requalified) — antitoxin Rv0909 mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 panC (requalified) — pantoate--beta-alanine ligase panC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.