MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3004 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv3212 (family_assigned) — hypothetical protein Rv3212 rseA (requalified) — anti-sigma E factor RseA rseA Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2980 (dark) — DUF3515 domain-containing protein Rv2980 Rv0010c (family_assigned) — PH domain-containing protein Rv0010c Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 lppL (family_assigned) — hypothetical protein lppL Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c bcp (requalified) — thioredoxin-dependent thiol peroxidase bcp xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c sapM (requalified) — phosphatidylinositol-3-phosphatase sapM Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c tatB (requalified) — Sec-independent protein translocase protein TatB tatB sigE (requalified) — RNA polymerase sigma factor SigE sigE htrA (requalified) — serine protease HtrA htrA Rv1083 (dark) — hypothetical protein Rv1083 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c crgA (requalified) — cell division protein CrgA crgA Rv3839 (requalified) — DUF2470 domain-containing protein Rv3839 Rv2732c (family_assigned) — hypothetical protein Rv2732c lppM (requalified) — lipoprotein LppM lppM Rv1100 (family_assigned) — hypothetical protein Rv1100 ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 tagA (requalified) — DNA-3-methyladenine glycosylase I tagA folP2 (requalified) — dihydropteroate synthase folP2 gpgS (requalified) — glucosyl-3-phosphoglycerate synthase gpgS Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv3851 (dark) — hypothetical protein Rv3851 espR (family_assigned) — type VII secretion system ESX-1 transcriptional re espR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.