MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3000 · 46 genes shown · anchor lppY · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3000 (family_assigned) — ABC transporter permease Rv3000 lppY (family_assigned) — DUF1259 domain-containing protein lppY Rv0986 (family_assigned) — ABC transporter ATP-binding protein Rv0986 glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 deoA (requalified) — thymidine phosphorylase deoA add (requalified) — adenosine deaminase add cdd (requalified) — cytidine deaminase cdd idsB (family_assigned) — polyprenyl synthetase family protein idsB Rv2998A (family_assigned) — Conserved hypothetical protein Rv2998A idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 dnaK (requalified) — molecular chaperone DnaK dnaK dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2275 (requalified) — cyclo(L-tyrosyl-L-tyrosyl) synthase Rv2275 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 Rv0987 (family_assigned) — FtsX-like permease family protein Rv0987 Rv0072 (family_assigned) — FtsX-like permease family protein Rv0072 Rv2563 (family_assigned) — ABC transporter permease Rv2563 Rv0988 (family_assigned) — lipocalin-like domain-containing protein Rv0988 gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp Rv2562 (family_assigned) — Conserved hypothetical protein Rv2562 Rv0393 (family_assigned) — hypothetical protein Rv0393 Rv2561 (family_assigned) — Conserved hypothetical protein Rv2561 cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 upp (requalified) — uracil phosphoribosyltransferase upp deoD (requalified) — purine-nucleoside phosphorylase deoD deoC (requalified) — deoxyribose-phosphate aldolase deoC pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR adoK (family_assigned) — carbohydrate kinase family protein adoK iunH (requalified) — nucleoside hydrolase IunH iunH sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1734c (family_assigned) — hypothetical protein Rv1734c dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.