MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2985 · 46 genes shown · anchor ppk1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mutT1 (requalified) — NUDIX hydrolase mutT1 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 cofC (requalified) — 2-phospho-L-lactate guanylyltransferase cofC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv2708c (family_assigned) — hypothetical protein Rv2708c cobQ1 (requalified) — cobyric acid synthase cobQ1 ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD ppk2 (requalified) — polyphosphate kinase ppk2 ppa (requalified) — inorganic diphosphatase ppa mshD (requalified) — mycothiol synthase mshD Rv0496 (family_assigned) — hypothetical protein Rv0496 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 fbiA (requalified) — 2-phospho-L-lactate transferase fbiA fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv1261c (requalified) — F420H(2)-dependent quinone reductase Rv1261c fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c pyrG (requalified) — CTP synthase pyrG xerD (requalified) — site-specific tyrosine recombinase XerD xerD Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD mctB (requalified) — copper transporter MctB mctB cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM cobH (requalified) — precorrin-8X methylmutase cobH cobK (requalified) — cobalt-precorrin-6A reductase cobK cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL cobG (requalified) — precorrin-3B synthase cobG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.