MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2972c · 46 genes shown · anchor recG · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c recG (requalified) — ATP-dependent DNA helicase RecG recG Rv2974c (family_assigned) — hypothetical protein Rv2974c Rv2975c (family_assigned) — hypothetical protein Rv2975c rnpA (requalified) — ribonuclease P protein component rnpA rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD gltB (family_assigned) — glutamate synthase large subunit gltB Rv2390c (family_assigned) — hypothetical protein Rv2390c erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 Rv1362c (family_assigned) — hypothetical protein Rv1362c Rv1363c (dark) — hypothetical protein Rv1363c Rv1972 (requalified) — Mce associated membrane protein Rv1972 murB (requalified) — UDP-N-acetylmuramate dehydrogenase murB dprA (requalified) — DNA-processing protein DprA dprA rplR (requalified) — 50S ribosomal protein L18 rplR Rv2417c (family_assigned) — DegV family protein Rv2417c TB16.3 (family_assigned) — SRPBCC family protein TB16.3 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv3205c (family_assigned) — hypothetical protein Rv3205c yidD (requalified) — membrane protein insertion efficiency factor YidD yidD yidC (requalified) — membrane protein insertase YidC yidC Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpmH (requalified) — 50S ribosomal protein L34 rpmH rpsL (requalified) — 30S ribosomal protein S12 rpsL rplD (requalified) — 50S ribosomal protein L4 rplD gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1254 (requalified) — acyltransferase Rv1254 fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD Rv3492c (requalified) — Mce associated protein Rv3492c pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.