MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2955c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2955c (requalified) — [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-r Rv2955c Rv2956 (requalified) — [alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyrano Rv2956 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2957 (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2957 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 iniB (requalified) — isoniazid-induced protein IniB iniB Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS11 (family_assigned) — PE-PGRS family protein PE_PGRS11 PE_PGRS11 Rv3377c (requalified) — type B diterpene cyclase Rv3377c pks1 (requalified) — polyketide synthase pks1 Rv2959c (requalified) — rhamnosyl O-methyltransferase Rv2959c epiA (requalified) — GDP-L-fucose synthase epiA Rv2958c (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2209 (requalified) — MFS transporter Rv2209 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv1516c (requalified) — glycosyltransferase Rv1516c Rv1520 (requalified) — glycosyltransferase Rv1520 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2306A (family_assigned) — Possible conserved membrane protein Rv2306A Rv2306B (family_assigned) — Possible conserved membrane protein Rv2306B fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 fadD29 (requalified) — long-chain-fatty-acid--AMP ligase FadD29 fadD29 pks15 (requalified) — polyketide synthase pks15 entC (requalified) — isochorismate synthase entC Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c vapB24 (requalified) — antitoxin vapB24 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv3378c (requalified) — diterpene synthase Rv3378c erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 Rv2293c (family_assigned) — hypothetical protein Rv2293c idsB (family_assigned) — polyprenyl synthetase family protein idsB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.