MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2917 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2917 (family_assigned) — hypothetical protein Rv2917 dinG (requalified) — ATP-dependent helicase DinG dinG rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ polA (requalified) — DNA polymerase I polA Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c Rv2090 (requalified) — 5'-3' exonuclease Rv2090 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC Rv2529 (family_assigned) — hypothetical protein Rv2529 helZ (requalified) — DEAD/DEAH box helicase helZ Rv3258c (dark) — hypothetical protein Rv3258c Rv2256c (dark) — hypothetical protein Rv2256c mec (requalified) — CysO-cysteine peptidase mec Rv1277 (family_assigned) — hypothetical protein Rv1277 sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv2035 (family_assigned) — SRPBCC family protein Rv2035 Rv2036 (family_assigned) — maleylpyruvate isomerase family mycothiol-dependen Rv2036 Rv2034 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2034 ligC (requalified) — ATP-dependent DNA ligase ligC whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 topA (requalified) — type I DNA topoisomerase topA lprE (family_assigned) — LppP/LprE family lipoprotein lprE rplA (requalified) — 50S ribosomal protein L1 rplA Rv2102 (family_assigned) — hypothetical protein Rv2102 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv3259 (family_assigned) — metallopeptidase family protein Rv3259 Rv3587c (family_assigned) — hypothetical protein Rv3587c fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.