MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2910c · 46 genes shown · anchor dacB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2910c (family_assigned) — hypothetical protein Rv2910c Rv1874 (family_assigned) — hypothetical protein Rv1874 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c dacB2 (family_assigned) — penicillin-binding protein DacB2 dacB2 Rv0293c (requalified) — alpha/beta fold hydrolase Rv0293c Rv2908c (family_assigned) — RNA-binding protein Rv2908c rpsP (requalified) — 30S ribosomal protein S16 rpsP Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 virS (family_assigned) — AraC family transcriptional regulator virS Rv1817 (family_assigned) — FAD-binding protein Rv1817 trmD (requalified) — tRNA (guanosine(37)-N1)-methyltransferase TrmD trmD rimM (requalified) — ribosome maturation factor RimM rimM Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 Rv3577 (requalified) — hypothetical protein Rv3577 nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF dacB1 (requalified) — D-alanyl-D-alanine carboxypeptidase DacB1 dacB1 dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 ldtB (requalified) — L%2CD-transpeptidase LdtMt2 ldtB tam (requalified) — trans-aconitate 2-methyltransferase tam pirG (requalified) — exported repetitive protein pirG lipE (requalified) — lipase LipE lipE Rv2913c (family_assigned) — amidohydrolase family protein Rv2913c mprB (requalified) — two-component system sensor histidine kinase MprB mprB Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpsI (requalified) — 30S ribosomal protein S9 rpsI rplS (requalified) — 50S ribosomal protein L19 rplS rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmE (requalified) — 50S ribosomal protein L31 rpmE rpmA (requalified) — 50S ribosomal protein L27 rpmA rplR (requalified) — 50S ribosomal protein L18 rplR rplQ (requalified) — 50S ribosomal protein L17 rplQ echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.