MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2908c · 46 genes shown · anchor rpsP · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2908c (family_assigned) — RNA-binding protein Rv2908c rpsP (requalified) — 30S ribosomal protein S16 rpsP rimM (requalified) — ribosome maturation factor RimM rimM Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpsI (requalified) — 30S ribosomal protein S9 rpsI trmD (requalified) — tRNA (guanosine(37)-N1)-methyltransferase TrmD trmD rplS (requalified) — 50S ribosomal protein L19 rplS rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsO (requalified) — 30S ribosomal protein S15 rpsO rplT (requalified) — 50S ribosomal protein L20 rplT rpmE (requalified) — 50S ribosomal protein L31 rpmE rpsT (requalified) — 30S ribosomal protein S20 rpsT rplL (requalified) — 50S ribosomal protein L7/L12 rplL rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmA (requalified) — 50S ribosomal protein L27 rpmA rplR (requalified) — 50S ribosomal protein L18 rplR rplQ (requalified) — 50S ribosomal protein L17 rplQ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rpsS (requalified) — 30S ribosomal protein S19 rpsS yidC (requalified) — membrane protein insertase YidC yidC rnpA (requalified) — ribonuclease P protein component rnpA yidD (requalified) — membrane protein insertion efficiency factor YidD yidD gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA nusA (requalified) — transcription termination factor NusA nusA rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB rpsH (requalified) — 30S ribosomal protein S8 rpsH rpmH (requalified) — 50S ribosomal protein L34 rpmH rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP rpsM (requalified) — 30S ribosomal protein S13 rpsM rplC (requalified) — 50S ribosomal protein L3 rplC rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rpsE (requalified) — 30S ribosomal protein S5 rpsE rplX (requalified) — 50S ribosomal protein L24 rplX

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.