MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2907c · 46 genes shown · anchor trmD · open gene page → · ← back to 1 hop

Evidence: Min score 0
rimM (requalified) — ribosome maturation factor RimM rimM trmD (requalified) — tRNA (guanosine(37)-N1)-methyltransferase TrmD trmD rpsP (requalified) — 30S ribosomal protein S16 rpsP atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rpsS (requalified) — 30S ribosomal protein S19 rpsS Rv2908c (family_assigned) — RNA-binding protein Rv2908c rplS (requalified) — 50S ribosomal protein L19 rplS rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB rplD (requalified) — 50S ribosomal protein L4 rplD rpsF (requalified) — 30S ribosomal protein S6 rpsF rplA (requalified) — 50S ribosomal protein L1 rplA rpsL (requalified) — 30S ribosomal protein S12 rpsL rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA nusA (requalified) — transcription termination factor NusA nusA rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmE (requalified) — 50S ribosomal protein L31 rpmE rpmA (requalified) — 50S ribosomal protein L27 rpmA rplR (requalified) — 50S ribosomal protein L18 rplR rplQ (requalified) — 50S ribosomal protein L17 rplQ atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE rpsH (requalified) — 30S ribosomal protein S8 rpsH rplB (requalified) — 50S ribosomal protein L2 rplB rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplP (requalified) — 50S ribosomal protein L16 rplP Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpsI (requalified) — 30S ribosomal protein S9 rpsI rpmH (requalified) — 50S ribosomal protein L34 rpmH rpsR2 (requalified) — 30S ribosomal protein S18 rpsR2 rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsC (requalified) — 30S ribosomal protein S3 rpsC rplC (requalified) — 50S ribosomal protein L3 rplC rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rplO (requalified) — 50S ribosomal protein L15 rplO rplK (requalified) — 50S ribosomal protein L11 rplK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.