MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2906c · 46 genes shown · anchor rimM · open gene page → · ← back to 1 hop

Evidence: Min score 0
trmD (requalified) — tRNA (guanosine(37)-N1)-methyltransferase TrmD trmD rimM (requalified) — ribosome maturation factor RimM rimM rpsP (requalified) — 30S ribosomal protein S16 rpsP atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rplS (requalified) — 50S ribosomal protein L19 rplS rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA nusA (requalified) — transcription termination factor NusA nusA Rv2908c (family_assigned) — RNA-binding protein Rv2908c rpsD (requalified) — 30S ribosomal protein S4 rpsD rplB (requalified) — 50S ribosomal protein L2 rplB secY (family_assigned) — preprotein translocase subunit SecY secY rplE (requalified) — 50S ribosomal protein L5 rplE rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsS (requalified) — 30S ribosomal protein S19 rpsS rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmE (requalified) — 50S ribosomal protein L31 rpmE rpmA (requalified) — 50S ribosomal protein L27 rpmA rplR (requalified) — 50S ribosomal protein L18 rplR rplQ (requalified) — 50S ribosomal protein L17 rplQ atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rpsH (requalified) — 30S ribosomal protein S8 rpsH rpmH (requalified) — 50S ribosomal protein L34 rpmH rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpsM (requalified) — 30S ribosomal protein S13 rpsM rimP (requalified) — ribosome maturation factor RimP rimP rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c rpsI (requalified) — 30S ribosomal protein S9 rpsI rplC (requalified) — 50S ribosomal protein L3 rplC rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rpsO (requalified) — 30S ribosomal protein S15 rpsO

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.