MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2897c · 46 genes shown · anchor viuB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2897c (family_assigned) — YifB family Mg chelatase-like AAA ATPase Rv2897c dprA (requalified) — DNA-processing protein DprA dprA Rv2898c (family_assigned) — YraN family protein Rv2898c viuB (requalified) — siderophore-interacting protein viuB fdhD (requalified) — formate dehydrogenase accessory sulfurtransferase fdhD Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv2414c (family_assigned) — ComEC/Rec2 family competence protein Rv2414c ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC xerC (requalified) — tyrosine recombinase XerC xerC fdhF (family_assigned) — FdhF/YdeP family oxidoreductase fdhF def (requalified) — peptide deformylase def Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv3242c (family_assigned) — ComF family protein Rv3242c mbtB (requalified) — phenyloxazoline synthase MbtB mbtB Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv2415c (family_assigned) — ComEA family DNA-binding protein Rv2415c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB recX (requalified) — recombination regulator RecX recX Rv2600 (family_assigned) — integral membrane protein Rv2600 apt (requalified) — adenine phosphoribosyltransferase apt Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 tyrA (requalified) — prephenate dehydrogenase TyrA tyrA whiA (family_assigned) — DNA-binding protein WhiA whiA qcrC (requalified) — cytochrome c qcrC tuf (requalified) — elongation factor Tu tuf rplU (requalified) — 50S ribosomal protein L21 rplU tig (requalified) — trigger factor tig rplV (requalified) — 50S ribosomal protein L22 rplV rplI (requalified) — 50S ribosomal protein L9 rplI rplQ (requalified) — 50S ribosomal protein L17 rplQ rplD (requalified) — 50S ribosomal protein L4 rplD moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.