MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2886c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2886c (requalified) — resolvase Rv2886c Rv2885c (requalified) — transposase Rv2885c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv3827c (requalified) — transposase Rv3827c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv2887 (family_assigned) — MarR family transcriptional regulator Rv2887 lprI (family_assigned) — MliC family protein lprI Rv2956 (requalified) — [alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyrano Rv2956 Rv3334 (family_assigned) — hypoxia response transcriptional regulator Rv3334 Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 Rv2566 (family_assigned) — hypothetical protein Rv2566 Rv2979c (family_assigned) — IS607 family transposase Rv2979c Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 Rv3828c (requalified) — resolvase Rv3828c Rv2792c (family_assigned) — IS607-like element IS1537 family transposase Rv2792c Rv0921 (family_assigned) — IS607-like element IS1535 family transposase Rv0921 thiL (requalified) — thiamine-phosphate kinase thiL fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 ltp1 (requalified) — lipid-transfer protein ltp1 Rv2327 (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2327 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c frdD (family_assigned) — fumarate reductase subunit FrdD frdD glbN (requalified) — group 1 truncated hemoglobin GlbN glbN frdC (family_assigned) — fumarate reductase subunit C frdC vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c Rv0613c (family_assigned) — SEC-C domain-containing protein Rv0613c Rv2957 (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2957 Rv2955c (requalified) — [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-r Rv2955c Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2959c (requalified) — rhamnosyl O-methyltransferase Rv2959c epiA (requalified) — GDP-L-fucose synthase epiA Rv2958c (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK Rv0398c (family_assigned) — hypothetical protein Rv0398c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.