MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2873 · 46 genes shown · anchor dxr · open gene page → · ← back to 1 hop

Evidence: Min score 0
mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE sigK (family_assigned) — sigma-70 family RNA polymerase sigma factor SigK sigK nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoA (family_assigned) — NADH-quinone oxidoreductase subunit A nuoA nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxs1 (requalified) — 1-deoxy-D-xylulose 5-phosphate synthase dxs1 dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c cdsA (requalified) — phosphatidate cytidylyltransferase cdsA Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c mpt70 (family_assigned) — fasciclin domain-containing protein mpt70 msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA ahpC (requalified) — peroxiredoxin AhpC ahpC Rv0794c (requalified) — oxidoreductase Rv0794c sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c rskA (requalified) — anti-sigma-K factor RskA rskA Rv0448c (dark) — hypothetical protein Rv0448c Rv0446c (family_assigned) — DUF1295 domain-containing protein Rv0446c ufaA1 (requalified) — class I SAM-dependent methyltransferase ufaA1 Rv0449c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0449c sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM nuoK (family_assigned) — NADH-quinone oxidoreductase subunit NuoK nuoK nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.