MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2867c · 46 genes shown · anchor gcpE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE rip (requalified) — zinc metalloprotease Rip rip dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr mpa (requalified) — proteasome ATPase mpa Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv3626c (requalified) — zinc-dependent metalloprotease Rv3626c Rv3015c (requalified) — methionine synthase Rv3015c Rv2864c (family_assigned) — penicillin-binding protein Rv2864c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv3268 (family_assigned) — hypothetical protein Rv3268 Rv2256c (dark) — hypothetical protein Rv2256c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c cdsA (requalified) — phosphatidate cytidylyltransferase cdsA mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxs1 (requalified) — 1-deoxy-D-xylulose 5-phosphate synthase dxs1 dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 prcA (family_assigned) — proteasome subunit alpha prcA pup (family_assigned) — ubiquitin-like protein Pup pup prcB (family_assigned) — proteasome subunit beta prcB mec (requalified) — CysO-cysteine peptidase mec glpK (requalified) — glycerol kinase GlpK glpK bpa (requalified) — proteasome activator protein Bpa bpa Rv1487 (family_assigned) — NfeD family protein Rv1487 ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv1489 (family_assigned) — hypothetical protein Rv1489 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 ahpE (requalified) — peroxiredoxin AhpE ahpE Rv2240c (family_assigned) — hypothetical protein Rv2240c frr (requalified) — ribosome recycling factor frr Rv1626 (family_assigned) — ANTAR domain-containing response regulator Rv1626 rpsA (requalified) — 30S ribosomal protein S1 rpsA dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt ppa (requalified) — inorganic diphosphatase ppa lpqA (family_assigned) — sensor domain-containing protein lpqA Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c ligA (requalified) — NAD-dependent DNA ligase LigA ligA metK (requalified) — S-adenosylmethionine synthetase metK ldtMt3 (requalified) — L%2CD-transpeptidase LdtMt3 ldtMt3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.