MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2840c · 46 genes shown · anchor nusA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2840c (family_assigned) — hypothetical protein Rv2840c nusA (requalified) — transcription termination factor NusA nusA infB (requalified) — translation initiation factor IF-2 infB rimP (requalified) — ribosome maturation factor RimP rimP rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA dinF (family_assigned) — MATE family efflux transporter dinF nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA rpsL (requalified) — 30S ribosomal protein S12 rpsL rplW (requalified) — 50S ribosomal protein L23 rplW rpsK (requalified) — 30S ribosomal protein S11 rpsK rplU (requalified) — 50S ribosomal protein L21 rplU rplD (requalified) — 50S ribosomal protein L4 rplD ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsB (requalified) — 30S ribosomal protein S2 rpsB rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsJ (requalified) — 30S ribosomal protein S10 rpsJ truB (requalified) — tRNA pseudouridine(55) synthase TruB truB ugpA (family_assigned) — sugar ABC transporter permease ugpA phyA (requalified) — presqualene diphosphate synthase HpnD phyA cysC (requalified) — adenylyl-sulfate kinase cysC cysH (requalified) — phosphoadenylyl-sulfate reductase cysH cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rplT (requalified) — 50S ribosomal protein L20 rplT rpsI (requalified) — 30S ribosomal protein S9 rpsI rplV (requalified) — 50S ribosomal protein L22 rplV rpsD (requalified) — 30S ribosomal protein S4 rpsD rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rpsH (requalified) — 30S ribosomal protein S8 rpsH rplM (requalified) — 50S ribosomal protein L13 rplM rplF (requalified) — 50S ribosomal protein L6 rplF rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmE (requalified) — 50S ribosomal protein L31 rpmE rpmA (requalified) — 50S ribosomal protein L27 rpmA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.