MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2838c · 46 genes shown · anchor infB · open gene page → · ← back to 1 hop

Evidence: Min score 0
rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA infB (requalified) — translation initiation factor IF-2 infB nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA dinF (family_assigned) — MATE family efflux transporter dinF truB (requalified) — tRNA pseudouridine(55) synthase TruB truB Rv2840c (family_assigned) — hypothetical protein Rv2840c rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsG (requalified) — 30S ribosomal protein S7 rpsG rimP (requalified) — ribosome maturation factor RimP rimP rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsB (requalified) — 30S ribosomal protein S2 rpsB rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO cysC (requalified) — adenylyl-sulfate kinase cysC cysH (requalified) — phosphoadenylyl-sulfate reductase cysH cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ ugpA (family_assigned) — sugar ABC transporter permease ugpA phyA (requalified) — presqualene diphosphate synthase HpnD phyA guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA pptT (requalified) — 4'-phosphopantetheinyl transferase pptT Rv2795c (requalified) — metallophosphoesterase Rv2795c fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu nusA (requalified) — transcription termination factor NusA nusA rplM (requalified) — 50S ribosomal protein L13 rplM rplF (requalified) — 50S ribosomal protein L6 rplF rplD (requalified) — 50S ribosomal protein L4 rplD rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rpmD (requalified) — 50S ribosomal protein L30 rpmD rplI (requalified) — 50S ribosomal protein L9 rplI rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsM (requalified) — 30S ribosomal protein S13 rpsM rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rplT (requalified) — 50S ribosomal protein L20 rplT rpsI (requalified) — 30S ribosomal protein S9 rpsI

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.