MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2836c · 46 genes shown · anchor infB · open gene page → · ← back to 1 hop

Evidence: Min score 0
dinF (family_assigned) — MATE family efflux transporter dinF infB (requalified) — translation initiation factor IF-2 infB rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA Rv2840c (family_assigned) — hypothetical protein Rv2840c ugpA (family_assigned) — sugar ABC transporter permease ugpA phyA (requalified) — presqualene diphosphate synthase HpnD phyA gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap rpsA (requalified) — 30S ribosomal protein S1 rpsA ugpE (family_assigned) — carbohydrate ABC transporter permease ugpE ugpB (family_assigned) — ABC transporter substrate-binding protein ugpB ugpC (family_assigned) — ABC transporter ATP-binding protein ugpC Rv0955 (family_assigned) — DUF6350 family protein Rv0955 rpsB (requalified) — 30S ribosomal protein S2 rpsB rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsE (requalified) — 30S ribosomal protein S5 rpsE truB (requalified) — tRNA pseudouridine(55) synthase TruB truB rpsK (requalified) — 30S ribosomal protein S11 rpsK cysC (requalified) — adenylyl-sulfate kinase cysC cysH (requalified) — phosphoadenylyl-sulfate reductase cysH cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ nusA (requalified) — transcription termination factor NusA nusA rimP (requalified) — ribosome maturation factor RimP rimP ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC Rv2039c (family_assigned) — carbohydrate ABC transporter permease Rv2039c uspB (family_assigned) — sugar ABC transporter permease UspB uspB idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 idsB (family_assigned) — polyprenyl synthetase family protein idsB pgk (requalified) — phosphoglycerate kinase pgk tpi (requalified) — triose-phosphate isomerase tpi fba (requalified) — class II fructose-bisphosphate aldolase fba eno (requalified) — phosphopyruvate hydratase eno pgi (requalified) — glucose-6-phosphate isomerase pgi tkt (requalified) — transketolase tkt rpsH (requalified) — 30S ribosomal protein S8 rpsH rplD (requalified) — 50S ribosomal protein L4 rplD rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsD (requalified) — 30S ribosomal protein S4 rpsD Rv2040c (family_assigned) — sugar ABC transporter permease Rv2040c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.