MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2829c · 46 genes shown · anchor vapB22 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC22 (family_assigned) — PIN domain-containing protein vapC22 vapB22 (family_assigned) — type II toxin-antitoxin system prevent-host-death vapB22 Rv2828A (dark) — hypothetical protein Rv2828A Rv2828c (family_assigned) — DUF1802 family protein Rv2828c echA16 (requalified) — enoyl-CoA hydratase echA16 Rv2827c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv2827c Rv2826c (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv2826c vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 ligC (requalified) — ATP-dependent DNA ligase ligC Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 Rv2825c (dark) — hypothetical protein Rv2825c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c vapB38 (requalified) — antitoxin vapB38 Rv2492 (requalified) — hypothetical protein Rv2492 Rv2491 (family_assigned) — TIGR00725 family protein Rv2491 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapB11 (requalified) — antitoxin VapB11 vapB11 vapB15 (requalified) — antitoxin VapB15 vapB15 Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c Rv2531c (requalified) — amino acid decarboxylase Rv2531c ilvA (requalified) — threonine ammonia-lyase ilvA vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv2008c (family_assigned) — hypothetical protein Rv2008c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.