MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2828c · 44 genes shown · anchor vapC22 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2828c (family_assigned) — DUF1802 family protein Rv2828c Rv2825c (dark) — hypothetical protein Rv2825c Rv2828A (dark) — hypothetical protein Rv2828A vapC22 (family_assigned) — PIN domain-containing protein vapC22 vapB22 (family_assigned) — type II toxin-antitoxin system prevent-host-death vapB22 Rv3779 (family_assigned) — DUF6541 family protein Rv3779 echA16 (requalified) — enoyl-CoA hydratase echA16 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv0517 (requalified) — acyltransferase Rv0517 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv2826c (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv2826c Rv2827c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv2827c Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c ligC (requalified) — ATP-dependent DNA ligase ligC Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE bpa (requalified) — proteasome activator protein Bpa bpa rfbD (family_assigned) — ABC transporter permease rfbD glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv0188 (requalified) — SPW repeat protein Rv0188 Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE Rv0779c (dark) — hypothetical protein Rv0779c Rv3707c (requalified) — hypothetical protein Rv3707c Rv0876c (requalified) — MFS transporter Rv0876c Rv0877 (dark) — DUF3027 domain-containing protein Rv0877 prrB (requalified) — two-component system sensor histidine kinase PrrB prrB Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c moeY (family_assigned) — Rv1355c family protein moeY Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.